I've already got a ticket submitted about this which is moving glacially slow since I'm having to slog through all of the basic troubleshooting such as "log out and log back in," "repair your files," "type /reloadui into your chat," "uninstall all mods," etc. I've finally got to a point where I think I've got them convinced something is actually buggy with my skill points since the ticket has finally been escalated to the online team, but I want to see if anyone knows what might be causing this since it might help point them in the right direction.
On one of my characters that was created in the early access period that was available before the game's official launch, I currently have 150 skill points earned. I can go through my achievements and verify exactly which ones these are and using Urich's Skill Point Tracker confirms all of the same skill points. When I do a full skill point respec it costs me 7500g as expected, but only actually refunds 147 skill points. At this point I have 147 skill points available but I can still start another respec that costs me 150g (i.e. for the other 3 skill points that weren't refunded.) The thing is, I can't actually apply this second respec since there are no points spent in any of my skill trees to refund. Even choosing "Clear All" then "All skill lines" doesn't refund these points. The game clearly thinks that I have earned those 3 skill points and spent them on something because it charged me 7500g for 150 skills when it refunded 147 and it's allowing me to start a second respec that costs 150g, but I can't access them. I remember a bug where if you respecced with points in Vampire or Lyncanthropy you'd lose those points, but I've never unlocked those skill lines on this character, so that can't be it. Any ideas? Were there skill lines or skills that changed and I've got 3 points spent on old versions of skills that the current system doesn't recognize maybe?